Package: hapassoc 1.2-9

hapassoc: Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm

The following R functions are used for inference of trait associations with haplotypes and other covariates in generalized linear models. The functions are developed primarily for data collected in cohort or cross-sectional studies. They can accommodate uncertain haplotype phase and handle missing genotypes at some SNPs.

Authors:K. Burkett <[email protected]>, B. McNeney <[email protected]>, J. Graham <[email protected]>, with code for case-control data contributed by Zhijian Chen <[email protected]>

hapassoc_1.2-9.tar.gz
hapassoc_1.2-9.zip(r-4.5)hapassoc_1.2-9.zip(r-4.4)hapassoc_1.2-9.zip(r-4.3)
hapassoc_1.2-9.tgz(r-4.4-x86_64)hapassoc_1.2-9.tgz(r-4.4-arm64)hapassoc_1.2-9.tgz(r-4.3-x86_64)hapassoc_1.2-9.tgz(r-4.3-arm64)
hapassoc_1.2-9.tar.gz(r-4.5-noble)hapassoc_1.2-9.tar.gz(r-4.4-noble)
hapassoc_1.2-9.tgz(r-4.4-emscripten)hapassoc_1.2-9.tgz(r-4.3-emscripten)
hapassoc.pdf |hapassoc.html✨
hapassoc/json (API)

Peer review:

Bug tracker:https://github.com/sfustatgen/research/issues

On CRAN:

2 exports 1.69 score 0 dependencies 6 mentions 16 scripts 543 downloads

Last updated 2 years agofrom:e844507d05. Checks:OK: 9. Indexed: yes.

Exports:hapassocpre.hapassoc

Dependencies: